These results again failed to reveal any endogenous Orc[Ala11] in the sample. To determine if our analysis of single, not pooled, eyestalk ganglion extracts was limiting our ability to detect signals from low abundance, endogenous Orc[Ala11], we this website analyzed pooled extracts of 11 and 35 heat-treated, H. americanus
eyestalk ganglia that were extracted with the solvent composition (90:1:9; methanol:water:glacial acetic acid) used in previous studies [21] and [30] where Orc[Ala11] was detected. To further increase the dynamic range for the detection of Orc[Ala11], we analyzed the extracts by HPLC Chip–nanoESI Q-TOF MS. When we analyzed data for the pooled extracts and generated EICs for the m/z 635.789, [M+2H]2+, ion for the isobaric Orc[1-11]-OMe or Orc[Ala11], a single peak, eluting at the retention time characteristic of Orc[1-11]-OMe, was observed (data not shown). We found no evidence for a peak at the retention time for Orc[Ala11]. When we initially embarked upon
our study of localized regions of H. americanus eyestalk tissues, we detected peaks attributed to Orc[1-11]-OMe in extracted tissue samples, but not in any eyestalk tissues analyzed directly by MALDI-FTMS. Because Belnacasan datasheet methanol is not used as a tissue washing solvent or as a matrix solvent in our protocol for the preparation of direct tissue samples, we felt confident that Orc[1-11]-OMe formation would be prevented during direct tissue analyses. To further explore the possibility that Orc[Ala11] is an endogenous neuropeptide in the H. americanus eyestalk ganglion, we analyzed additional localized SG, LG, XO/MT, MI and ME eyestalk tissue samples dissected from a minimum of three individuals using direct tissue MALDI-FTMS to determine if sampling variability or differences between individuals could be responsible for our inability
to detect putative Orc[Ala11]. Furthermore, we collected between three and ten spectra from different regions of each MALDI Amisulpride sample to account for heterogeneity within each sample. In the case of SGs, a source of putative Orc[Ala11] in a previous study, we have collected direct tissue spectra from more than 30 individuals. A representative MALDI-FT mass spectrum from a H. americanus SG gland is shown in Fig. 15A; an expansion of the mass range where Orc[Ala11] would appear ( Fig. 15B) reveals no signals characteristic of Orc[Ala11], although other orcokinin family peptides are abundant in the full MALDI-FT mass spectrum. We detected peaks for Orc[1-11] in some, but not all, spectra. In the replicated direct tissue MALDI-FTMS characterizations of localized pieces of eyestalk ganglion tissues from multiple individuals, we failed to detect signals characteristic of Orc[Ala11] in any spectra.