0 (GraphPad Software, San Diego,

CA), and the significant

0 (GraphPad Software, San Diego,

CA), and the significant differences are reported at P < 0.05. Nucleotide sequences accession number The sequences of 16S rRNA gene obtained in this study have been deposited in the GenBank database (EMBL, U.K.) under accession numbers KF515539-KF515557. Acknowledgments This work was supported by the Key Project of National Natural Science Foundation in China (30830098), National Natural Science Foundation in China (81070375), National Basic Research Program (973 Program) in China (2009CB522405), National High-tech R&D Program (863 Program) of China (2012AA021007) and Scientific Research Fund in Jiangsu Province (BK2009317). We thank Prof. Qingshun Zhao providing the zebrafish and embryos. References 1. Loftus EV Jr: Clinical epidemiology of inflammatory bowel disease: incidence, prevalence, and environmental influences. Gastroenterology 2004,126(6):1504–1517.PubMedCrossRef buy CCI-779 2. Fiocchi C: Inflammatory bowel disease: etiology and pathogenesis. Gastroenterology 1998,115(1):182–205.PubMedCrossRef 3. Frank DN, St Amand AL, Feldman RA, Boedeker EC, Harpaz N, Pace NR: Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc Natl Tariquidar Acad Sci U S A 2007,104(34):13780–13785.PubMedCentralPubMedCrossRef 4. Neish AS: Microbes in gastrointestinal health and disease. Gastroenterology 2009,136(1):65–80.PubMedCentralPubMedCrossRef

5. Bates JM, Mittge E, Kuhlman J, Baden KN, Cheesman SE, Guillemin K: Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation. Dev Biol 2006,297(2):374–386.PubMedCrossRef 6. Frank DN, Robertson CE, Hamm CM,

Kpadeh Z, Zhang T, Chen H, Zhu W, Sartor RB, Boedeker EC, Harpaz N, et al.: Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases. Inflamm selleck inhibitor Bowel Dis 2011,17(1):179–184.PubMedCrossRef 7. Gophna U, Sommerfeld K, Gophna S, Doolittle WF, Veldhuyzen van Zanten SJ: Differences between tissue-associated intestinal microfloras of patients with Crohn’s disease and ulcerative colitis. J Clin BIBW2992 Microbiol 2006,44(11):4136–4141.PubMedCentralPubMedCrossRef 8. Walker AW, Sanderson JD, Churcher C, Parkes GC, Hudspith BN, Rayment N, Brostoff J, Parkhill J, Dougan G, Petrovska L: High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease. BMC Microbiol 2011, 11:7.PubMedCentralPubMedCrossRef 9. Borody TJ, Warren EF, Leis SM, Surace R, Ashman O, Siarakas S: Bacteriotherapy using fecal flora: toying with human motions. J Clin Gastroenterol 2004,38(6):475–483.PubMedCrossRef 10. Kahn SA, Gorawara-Bhat R, Rubin DT: Fecal bacteriotherapy for ulcerative colitis: patients are ready, are we? Inflamm Bowel Dis 2012,18(4):676–684.PubMedCentralPubMedCrossRef 11.

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